add drug dosages parsing, add postgres db

This commit is contained in:
ipu 2025-08-07 01:04:44 +03:00
parent c218e0bbf3
commit 4a59ba5f4a
15 changed files with 856 additions and 122 deletions

1
alembic/README Normal file
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Generic single-database configuration.

84
alembic/env.py Normal file
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from logging.config import fileConfig
from sqlalchemy import engine_from_config
from sqlalchemy import pool
from alembic import context
from src import database as schema
# this is the Alembic Config object, which provides
# access to the values within the .ini file in use.
config = context.config
# Interpret the config file for Python logging.
# This line sets up loggers basically.
if config.config_file_name is not None:
fileConfig(config.config_file_name)
# add your model's MetaData object here
# for 'autogenerate' support
# from myapp import mymodel
# target_metadata = mymodel.Base.metadata
target_metadata = schema.Base.metadata
# other values from the config, defined by the needs of env.py,
# can be acquired:
# my_important_option = config.get_main_option("my_important_option")
# ... etc.
def run_migrations_offline() -> None:
"""Run migrations in 'offline' mode.
This configures the context with just a URL
and not an Engine, though an Engine is acceptable
here as well. By skipping the Engine creation
we don't even need a DBAPI to be available.
Calls to context.execute() here emit the given string to the
script output.
"""
from src.config import settings
url = settings.DATABASE_URL
context.configure(
url=url,
target_metadata=target_metadata,
literal_binds=True,
dialect_opts={"paramstyle": "named"},
render_as_batch=True,
)
with context.begin_transaction():
context.run_migrations()
def run_migrations_online() -> None:
"""Run migrations in 'online' mode.
In this scenario we need to create an Engine
and associate a connection with the context.
"""
from sqlalchemy import create_engine
from src.config import settings
url = settings.DATABASE_URL
connectable = create_engine(url)
with connectable.connect() as connection:
context.configure(
connection=connection,
target_metadata=target_metadata,
render_as_batch=True,
)
with context.begin_transaction():
context.run_migrations()
if context.is_offline_mode():
run_migrations_offline()
else:
run_migrations_online()

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alembic/script.py.mako Normal file
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"""${message}
Revision ID: ${up_revision}
Revises: ${down_revision | comma,n}
Create Date: ${create_date}
"""
from typing import Sequence, Union
from alembic import op
import sqlalchemy as sa
${imports if imports else ""}
# revision identifiers, used by Alembic.
revision: str = ${repr(up_revision)}
down_revision: Union[str, Sequence[str], None] = ${repr(down_revision)}
branch_labels: Union[str, Sequence[str], None] = ${repr(branch_labels)}
depends_on: Union[str, Sequence[str], None] = ${repr(depends_on)}
def upgrade() -> None:
"""Upgrade schema."""
${upgrades if upgrades else "pass"}
def downgrade() -> None:
"""Downgrade schema."""
${downgrades if downgrades else "pass"}

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"""add drug table
Revision ID: c509dcf806d4
Revises:
Create Date: 2025-08-06 19:33:52.814812
"""
from typing import Sequence, Union
from alembic import op
import sqlalchemy as sa
# revision identifiers, used by Alembic.
revision: str = 'c509dcf806d4'
down_revision: Union[str, Sequence[str], None] = None
branch_labels: Union[str, Sequence[str], None] = None
depends_on: Union[str, Sequence[str], None] = None
def upgrade() -> None:
"""Upgrade schema."""
# ### commands auto generated by Alembic - please adjust! ###
op.create_table('drugs',
sa.Column('id', sa.BigInteger(), nullable=False),
sa.Column('name', sa.String(), nullable=False),
sa.Column('dosage', sa.Float(), nullable=False),
sa.Column('dosage_unit', sa.String(), nullable=False),
sa.Column('unit_price', sa.Float(), nullable=False),
sa.Column('description', sa.Text(), nullable=True),
sa.PrimaryKeyConstraint('id')
)
with op.batch_alter_table('drugs', schema=None) as batch_op:
batch_op.create_index(batch_op.f('ix_drugs_id'), ['id'], unique=False)
batch_op.create_index(batch_op.f('ix_drugs_name'), ['name'], unique=False)
# ### end Alembic commands ###
def downgrade() -> None:
"""Downgrade schema."""
# ### commands auto generated by Alembic - please adjust! ###
with op.batch_alter_table('drugs', schema=None) as batch_op:
batch_op.drop_index(batch_op.f('ix_drugs_name'))
batch_op.drop_index(batch_op.f('ix_drugs_id'))
op.drop_table('drugs')
# ### end Alembic commands ###